Second round: running CIP2 & INVPIMA

 

For the second type of CIP calculation, you start with an azimuth and a (corrected) inclination image; a mask file is optional. The mask file is a "white-mask": it should have values larger than 0 where you want to use the image, it should be zero (0) for those parts of the image which you want to omit.

To run CIP2, second control file is necessary: ***.ctrl2. Again, control files are best copied and edited. Only the dotted lines are used in the program.

 

 

	---------INPUT----------
1) Title of problem
Black Hill quartzite undformed 8 µm thick
2a) x- and y dimension (max = 1524,1012)
620,620
2d) Reference direction for misorientation (N=0,90 E=90,90)
45,55
2e) Masking for pole figure and orientation image ? (1=yes, 0=no)
0
2f) Want misorientation, edge and orientation image ? (1=yes, 0=no)
1,1,1
2g) Pole figure correction (1,2,3=1/sin(inc+) 4=1/sqrt(), 5=1/sin(delta))
5
9) Stereographic Colour Lookup Table
[HEILBRONNER.CIP.CLUT]CIP-Standard.CLUT
---------OUTPUT----------
2) Final result files (Number = N$RESU):
azi
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.AZI
inc from polarization
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.INC-stretch
masking file (0 where o.k. >0 where masked)  ( different from CIP !!!)
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.azi
edges using 2 neighbours                     ( different from CIP !!!)
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.EDG2
edges using 4 neighbours                     ( different from CIP !!!)
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.EDG4
        absolute misorientation from North (0,90)
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.MISN
        absolute misorientation from East (90,90)
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.MISE

 

As before, using Fetch, all files are transferred to an account on the DecAlpha (IP 131.152.51.4). Using NCSA Telnet, the user logs into this account. From the appropriate subdirectory, the program, CIP2 is started by pressing CIP2. The following dialogue is displayed (the answers which the user has to provide are high-lighted):

 

$ cip2
-------------------------------------------------
*CIP second cycle: using azi, inc, and mask files
-------------------------------------------------
*calling CONTROL
NAME OF CONTROLE FILE > bhq-08.ctrl2
   -------------------------------------------------
*calling READFILES
*calling READFILES: azi
FILENAME
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.AZI
EXIST         T
RECL                  620
*calling READFILES: inc
FILENAME
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.INC-stretch
EXIST         T
RECL                  512
*calling READFILES: mask
FILENAME
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.azi
EXIST         T
RECL                  620
*   xdim*ydim=itot          620         620      384400
-------------------------------------------------
*calling SEGMENT
-------------------------------------------------
*calling WRITEFILES
 calling WRITEFILES: edge: NR$EDGE_2=4
 calling WRITEFILES: edge: NR$EDGE_4=5
 calling WRITEFILES: edge: NR$misN=6
 calling WRITEFILES: edge: NR$misE=7
 calling WRITEFILES: edge: NR$misH=8
 calling WRITEFILES: edge: NR$misR=9
-------------------------------------------------
*calling POLEFIGURE using mask
*   imask =              0 (0=no,1=yes)
*   polcorr =            5 (option 1-5)
 
*  AZI(=IxMAXEO), INC(=JxMAXEO), xMAXEO, amaxeo:
        173          85   1914.000      0.1332288
 
*  write 36*36 image matrix ---2
*  max of (36*36) cpf matrix (real) at i,j =           35          17
*  xstereo(         175,          85) =    6214.000
*  scaling for real =   4.1036371E-02 36*36 pixstereo scaled
 
*  write CPF text matrix
*  max of scaled (36*36) cpf matrix at i,j =           31           4
*  xstereo(         155,          20) =    8617.222
*  scaling for CPF (max=9999) =    1.160351
-------------------------------------------------
*calling AVA
FILENAME
[HEILBRONNER.CIP.CLUT]CIP-Standard.CLUT
EXIST         T
RECL                  180
-------------------------------------------------
$

 

Again, to calculate a pole figure presentation of the ***.cpf file, INVPIMA is used. INVPIMA is started by pressing INVPIMA. The following dialogue is displayed (the answers which the user has to provide are high-lighted):

 

$ invpima
WHICH ***.CPF FILE ? > bhq-08.cpf
   [HEILBRONNER.CIP.renee.bhq-08]bhq-08.CPF
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.pix180
[HEILBRONNER.CIP.renee.bhq-08]bhq-08.pix036
Do you want this pole figure ? (Y/N) > y
Name of stereonet data file [bhq-08.POLTXT] > <return>
   Name of stereonet IMAGE file ? [bhq-08.POLFIG] >  <return>
    
 
I,J,ICPFMAX=    31    4 9999
 
Do you want to rotate and/or tilt pole figure (Y/N) ? > <return>
 
...calculating...
 
 
************************************
 
Maximum of STEREO is at ( 7, 5):      7.15543
 
 
$

 


Top | Setting up the microscope and the scanner | Acquiring images | Saving input data | Rematching the stack | First round: CIPD & INVPIMA | Viewing the output of CIPD | Correcting the inclination image | Second round: running CIP2 & INVPIMA | Viewing the output of CIP2 | SUMMARY CIP