SUMMARY CIP

input

program

option

output

takes (EOS camera)

+Pol, l, IF660

NIH Image

Lazy stack

 

matched CIP input:

19 .rot, .eup, .sup, .cirpol

19 rot (000...180)

2 (tilt) eup, sup

1 cirpol

CIP

INVPIMA

.ctrl

 

.coi-CIP, polfig, .cpf, .err

.edga, .edgp, .azi, .inca, .incp,

.misE, .misH, .misN, .misR

.inc

 

NIH Image

 

Lazy view & handle

 

.inc-stretch or

.inc-stretch-smooth

 

.azi

.inc-stretch

.mask

 

CIP2

INVPIMA

 

.ctrl2

 Lazy LUT

.coi-CIP2, .polfig

optional: [.edg2, .edg2]

[.misE, .misH, .misN, .misR]

 

.polfig (36·36)

NIH Image

Lazy pole

.pol (e.g., 180·180)


Top | Setting up the microscope and the scanner | Acquiring images | Saving input data | Rematching the stack | First round: CIPD & INVPIMA | Viewing the output of CIPD | Correcting the inclination image | Second round: running CIP2 & INVPIMA | Viewing the output of CIP2 | SUMMARY CIP